Lemon Poppy Seed Muffins

22058 minutes
Tessa Arias

Author:

Tessa Arias

Modified: April 2, 2026

These Lemon Poppy Seed Muffins bake up tall, soft, and tender with bright lemon flavor. Includes the key tricks for bakery-style muffin tops.

Tessa's Recipe Rundown

Taste: Fresh, vibrant, and tangy lemon balanced with a sweet glaze.
Texture: Soft and tender inside with tall, domed tops and slightly crisp edges.
Ease: Simple mixing method, no mixer or special equipment required!
Why you’ll love this recipe: The quickest and easiest way to turn your kitchen into a fancy cafe.

This post may contain affiliate links. Read our disclosure policy.

Most lemon poppy seed muffins fall into one of two camps: ultra tall and pretty but dry. Or, moist yet flat. I wanted both.

lemon poppyseed muffins on plates with lemon slices for garnish

After multiple test batches, I found the sweet spot comes down to three things: a slightly higher bake temperature, a mix of butter and oil, and letting the batter rest (just for 15 minutes!) before baking.

The result? Muffins that rise high with a soft, almost plush crumb and actually taste like lemon without any funky ingredients.

Recipe Ingredients

Muffins are simple, so each ingredient packs a powerful punch.

overhead view of all lemon poppyseed muffin recipe ingredients on a tray portioned and ready to go

All-Purpose Flour: Measured correctly (preferably by weight). Too much flour = dense and rubbery muffins.

Buttermilk: This is key for tenderness and flavor. The buttermilk acidity prevents too much gluten formation and the thick texture creates taller muffins. Use plain kefir as 1:1 substitute.

Butter + Oil (Important!): Butter brings flavor, while oil keeps the muffins soft for longer. In testing, using only butter made the muffins slightly drier the next day. Use any neutral oil (vegetable, avocado, etc.).

Baking Powder: This recipe uses a full tablespoon for strong lift. If you’re at altitude, you may need to reduce the measurement slightly.

Lemon Zest + Juice: Zest is where the real flavor lives! The icing contains both juice and zest for maximum lemon flavor, so don’t skip it. You’ll need about 4 medium lemons total (I always buy more in case I’m stuck with a dry lemon). 

Poppy Seeds: Always check freshness. If they smell stale or oily, they’ll taste that way in the muffins. I learned this the hard way!

Almond Extract (Optional): In addition to the vanilla, a tiny amount of almond extract enhances the lemon flavor without making the muffins taste almondy. I highly recommend trying it!

How to Make Lemon Poppy Seed Muffins (Step by Step)

mixing dry ingredients for lemon poppyseed muffins in a glass bowl with a whisk
1

Mix dry ingredients. In a large bowl, whisk together flour, sugar, poppy seeds, baking powder, and salt.

adding wet ingredients to dry ingredients for lemon poppyseed muffins
2

Add wet ingredients into dry ingredients. Make a well in the center of the dry ingredients and pour in the wet.

lemon poppyseed muffin batter in glass mixing bowl with spatula
3

Stir gently to combine. The batter will be slightly lumpy. Don’t overmix.

lemon poppyseed muffin batter in glass mixing bowl with spatula after resting 15 minutes showing it has become thicker
4

Rest the batter. If time permits, allow the batter to sit for 15-20 minutes so it thickens slightly for taller muffins.

muffin batter in muffin tin, spaced into every other cavity
5

Fill muffin tin. Line every other cavity with liners and fill completely full for tall muffins. Use two tins, or bake in batches, cooling tin between bakes.

freshly baked muffins in muffin tin, spaced into every other cavity
6

Bake. For 18-19 minutes, or until the edges are golden and a toothpick inserted into the center comes out clean.

lemon poppyseed muffin icing in bowl with a whisk to show thick consistency
7

Make the glaze. Whisk together powdered sugar and lemon juice until a thick icing forms. It should fall off the whisk in ribbons.

glazing lemon poppyseed muffins on a wire rack with a spoon
8

Glaze. Using a spoon, pour icing over cooled muffins.

garnishing lemon poppyseed muffins with fresh lemon zest
9

Garnish with lemon zest. This isn’t only pretty, but adds extra lemon flavor!

Tessa’s Tips for Taller Muffins

  1. Fill your muffin tin cavities completely full with batter. This will result in taller muffins with more pronounced muffin tops (and those slightly crisp edges!).
  2. Space out your muffins. Fill only every other cavity with muffin batter. This is done most easily with two muffin tins. This allows extra room for the muffins to rise tall, as well as enough air flow to cook the muffins more evenly.
  3. Rest your batter for at least 15 minutes before baking. You can do this in the mixing bowl or in the muffin tin. Rest up to overnight, covered.

Sprinkle of Science

Storage & Make ahead

Store in an airtight container for up to 2 days. To make ahead, mix the batter and refrigerate overnight, then bake straight from the fridge.

Freezing Instructions

Freeze unglazed muffins for up to 3 months. Thaw at room temperature. Glaze after thawing for best texture.

Test Kitchen Notes


The first version of this recipe was published in 2012, then revamped and updated in 2020. Recently, in 2026, I decided to make the recipe and felt underwhelmed by the results. 

I’ve learned a lot in just 6 years, so I began testing out some tweaks to achieve taller, more flavorful muffins without sacrificing a soft and tender texture. 

behind the scenes photo of testing the muffin recipe

1. Adjusting Ratios

I increased the flour and sugar slightly for better structure, as well as switching to buttermilk for better flavor and height, and adding more lemon zest. Lastly, a touch of oil alongside the melted butter helped create a tender texture that stays soft for longer.

iPhone photos of muffins in the test kitchen, one batch baked at 375°F and the other at 400°F

2. Baking Temperatures

Next up I experimented with baking temperatures. The key to tall muffins is a high temperature, but I didn’t want the edges to burn!

iPhone photo of 2 lemon poppyseed muffins compared, one baked immediately and one baked after resting the batter 15 minutes, showing a much taller muffin top

3. Resting Batter

The original recipe recommended an overnight rise, so my recipe tester experimented with resting intervals and we learned we really only needed a 15-minute rest (but an overnight rise works too if you want to prep ahead). 

Frequently Asked Questions

How do you get tall muffin tops?

Fill the muffin cups completely full, fill every other cavity, and let the batter rest before baking. These three steps create a thicker batter and better heat circulation, which leads to higher domes.

Can I skip the batter resting time?

Yes, but your muffins won’t rise as tall. Even 15 minutes makes a noticeable difference in height and texture. Which is about the time it takes to preheat the oven and clean up!

Can I substitute buttermilk?

The best substitute is plain kefir. Adding lemon juice or vinegar to milk just doesn’t have the same effect but can work in a pinch if you’re out of options.

Why are my muffins dense?

Overmixing is the most common cause. Stir just until combined, lumps are okay. Too much flour or expired baking powder can also lead to dense muffins.

Can I make these ahead of time?

Yes! Bake and store for up to 2 days, or freeze without glaze for longer storage. You can also mix the batter and refrigerate overnight, then bake straight from the fridge.

Can I make these without poppy seeds?

Yep, just omit them! The muffins will still have great flavor.

lemon poppyseed muffin on a plate with bite taken out to show soft interior
Yields: 9 muffins

How To Make

Lemon Poppy Seed Muffins

Yields: 9 muffins
Prep Time 40 minutes
Cook Time 18 minutes
Total Time 58 minutes
Review Recipe Print Recipe
Prep Time 40 minutes
Cook Time 18 minutes
Total Time 58 minutes
Review Recipe Print Recipe
These Lemon Poppy Seed Muffins bake up tall, soft, and tender with bright lemon flavor. Includes the key tricks for bakery-style muffin tops.

Email This Recipe

Enter your email, and we’ll send it to your inbox.

GDPR Consent

Ingredients

For the muffins:

  • 2 1/4 cups (286 grams) all-purpose flour, measured correctly
  • 1 cup (200 grams) granulated sugar
  • 2 tablespoons poppy seeds*
  • 1 tablespoon baking powder
  • 1/2 teaspoon fine sea salt
  • 1 cup (240 grams) buttermilk, at room temperature
  • 1 stick (113 grams) unsalted butter, melted and cooled
  • 2 tablespoons neutral oil (such as avocado or canola)
  • 2 large eggs, at room temperature
  • 2 tablespoons fresh lemon zest**
  • 2 tablespoons fresh lemon juice
  • 1 teaspoon vanilla extract
  • ¼ teaspoon almond extract, optional

For the lemon glaze:

  • 1 cup (125 grams) powdered sugar, sifted
  • 2 tablespoons fresh lemon juice
  • Lemon zest, for garnish**

Instructions

Make the muffins:

  • Preheat the oven to 375°F. Line two standard muffin tins with 9 paper liners, spacing them in every other cavity to allow for air flow and larger muffin tops.
  • In a large bowl, whisk together the flour, sugar, poppy seeds, baking powder, and salt.
  • In a small bowl, whisk together the buttermilk, cooled melted butter, oil, eggs, lemon zest, juice, vanilla extract, and almond extract (if using). Pour into the dry ingredients and stir with a rubber spatula until just combined.
  • If time permits, rest the batter at room temperature for 15 to 20 minutes to encourage taller muffin tops. You can also chill this batter, covered, overnight in the fridge. Bake from the fridge.
  • Fill each muffin liner completely full with batter. The batter should mound slightly above the rim.
  • Bake until the edges are golden brown and a toothpick inserted in the center comes out clean, about 18 to 19 minutes. Let cool in pan for 5 minutes, then transfer to wire rack to cool completely.

Make the glaze:

  • In a small bowl, stir together the powdered sugar and lemon juice until a smooth, thick glaze forms. Drizzle or dip the cooled muffins. Top with lemon zest. If transporting or storing, let the glaze set beforehand.
  • Serve immediately, or store in an airtight container at room temperature for up to 2 days. Muffins can also be frozen for up to 3 months.

Notes

*Double-check the expiration date on your poppy seeds and take a quick sniff before using. If they smell off, that flavor will carry into your muffins.
** You’ll need about 4 medium lemons. Zest the lemons (including what’s needed for the glaze) before juicing.

This recipe was originally published in 2012 and updated in 2026 with recipe improvements, new photos, and more baking tips. Photos by Joanie Simon.

0 0 votes
Recipe Rating
guest
Recipe Rating




220 Comments
Inline Feedbacks
View all comments
Jess
Jess
16 hours ago

I made your lemon poppy seed muffins with the previous recipe a few months ago and it was excellent. My mom said they were the best lemon poppy seed muffins she’s ever had. That recipe was a keeper and I planned to use it as my go to for lemon poppy seed muffins for basically the rest of my life. So I find myself feeling super irritated that the recipe has now changed. What was changed from the previous recipe and how can I get a copy of that? I guess that will teach me not to wait to print out the recipes that I love right away.

John
John
Reply to  Jess
12 hours ago

Voilà the ingredient list from these muffins as they were published in 2024. (Aren’t you proud of me?)

Ingredients

▢ 2 cups (254 grams) all-purpose flour (new: 2 1/4 C./ 286g)
▢ 3/4 cup (150 grams) granulated sugar (new: 1 C./200g)
▢ 2 tablespoons poppy seeds – no change
▢ 1 tablespoon baking powder – no change
▢ 1/2 teaspoon baking soda (removed in new version)
▢ 1/2 teaspoon fine salt – no change
▢ 1 cup whole milk, at room temperature (now buttermilk)
▢ 1 stick (113 grams) unsalted butter, melted and cooled – no change
▢ 1 large egg, at room temperature (new: 2 eggs plus 2 T. oil)
▢ 2 tablespoons fresh lemon juice – no change
▢ 1 1/2 tablespoons fresh lemon zest (new: 2 T. zest)

For the lemon glaze:

▢ 1 cup (125 grams) powdered sugar – no change
▢ 2 tablespoons fresh lemon juice – no change
New: lemon zest for garnish

Instructions from 2024:
Instructions

Preheat the oven to 400°F. Line a standard muffin tin with paper liners.
In a large bowl, whisk together the flour, sugar, poppy seeds, baking powder, baking soda, and salt.
In a small bowl, whisk together the milk, butter, egg, juice, and zest. Pour into the dry ingredients and stir with a rubber spatula until just combined. Do not overmix – there should be a couple streaks of flour remaining.* Divide evenly among the muffin tin cups.
Bake until golden brown and a toothpick inserted in the center comes out clean and the edges are golden, about 15 minutes. Let cool until barely warm.
Serve, or store in an airtight at room temperature for 3 days. Muffins can also be frozen in an airtight container for up to 3 months.

Make the glaze:

In a small bowl, combine the sugar and lemon juice with a fork until a smooth and thick glaze forms. Drizzle or dip each muffin top with the glaze. Let set before serving.

Jess
Jess
Reply to  John
9 hours ago

Thank you John!!! You are THE MAN right now (and yes, I am proud of you 😄) Rockstar status you are.

Diane
Diane
20 hours ago

Thank you for noting the gram weight of buttermilk. I don’t keep fresh buttermilk around but when I do use it, I freeze leftover liquid into cubes which store well. Using gram wt it’s easy to pull out the proper number of frozen cubes. Recipe is wonderful! Tips are very helpful.

Emily @ Handle the Heat
Emily @ Handle the Heat
Admin
Reply to  Diane
18 hours ago

Yes, freezing buttermilk is a game changer! We’re so glad to hear you loved the recipe, Diane 🙂

John
John
1 day ago

Absolutely delicious with a great, huge dome! I really wanted the lemon to pop, so I zested the lemons into the sugar first (granulated for the batter and powdered for the glaze) and really rubbed and smooshed it in with my fingertips for a minute or so. Wow! What a difference! Such bright lemony taste everywhere! Thanks for yet another great recipe, Tessa!

Emily @ Handle the Heat
Emily @ Handle the Heat
Admin
Reply to  John
18 hours ago

Yum, great thinking, John. So happy you loved them!

John
John
Reply to  Emily @ Handle the Heat
17 hours ago

Just as a by the way, there may be a small discrepancy to adjust in your recipe card. The “Yield” says 12 muffins, but the directions say, or at least imply, only 9. I was able to fill 9 cavities to the level described in the directions.

Emily @ Handle the Heat
Emily @ Handle the Heat
Admin
Reply to  John
17 hours ago

Yes, sorry about that. Updated!

John
John
Reply to  Emily @ Handle the Heat
16 hours ago

Thank you! Sorry to clog up this space, but thought I’d mention something. After reading a tip from Nik Sharma, the grandlings and I have started adding ground coriander to most baked items containing citrus, and especially lemon and lime. For these muffins, we stirred 1 tsp. freshly ground coriander seeds into the hot melted butter (to “bloom” it), and the muffins are truly spectacular!

JennyJenny
JennyJenny
1 day ago

I love, love, love lemon poppyseed muffins and can’t wait to try your recipe. One thing our café had I haven’t been able to duplicate is instead of glaze, they made the tops crunchy and sweet.. I assume with sugar. Do you know how I could do that? Thanks!

Emily @ Handle the Heat
Emily @ Handle the Heat
Admin
Reply to  JennyJenny
18 hours ago

Hi Jenny! Topping each muffin with about 1/2 to 1 teaspoon of granulated sugar (per cavity) before baking can create that crunchy, crackly texture I think you’re talking about! They might also use some sort of crunchy sparkling sugar — like this one from King Arthur Baking. Let us know if you try either!

pamela
pamela
2 months ago

Wonderful recipe. Will make it again. One extra step I did was to rub the lemon zest into the sugar first…

Claire
Claire
4 months ago

They were delicious! I definitely recommend using more lemon (I used 1 whole lemon and it still wasn’t tangy enough to my liking) and I substituted with oatmilk and it still came out great!

image
krista
krista
5 months ago

these are the best!! not nearly as dry as another recipe i tried. cut back on the lemon zest and they still have a distinct lemon flavour.

krista
krista
5 months ago

these are the best!! not nearly as dry as another recipe i tried. cut back on the lemon zest and they still have a distinct lemon flavour. will definitely make again💫

timmy
timmy
9 months ago

dude im so cracked at baking you dont even know i added not enough baking soda whoops still fire tho

IMG_20250612_212223
Priya V
Priya V
9 months ago

Hi! I was wondering if you have the oven temp and bake time for mini size muffins?

Emily @ Handle the Heat
Emily @ Handle the Heat
Admin
Reply to  Priya V
9 months ago

Hi Priya! We haven’t tested this recipe as mini muffins, but I’d recommend reducing the bake time to around 9-12 minutes. Just keep an eye on the color—they’re done when the edges are golden and a toothpick inserted in the center comes out clean. Let us know how they turn out if you give it a try!

Gwen Tan
Gwen Tan
10 months ago

Hi! I love all your recipes so far!!! Thank you for all the added info from your experimenting and the science behind it. Amazing <3

I was wondering if the lemon can be swappped with orange to make orange poppyseed muffins? Any chance you’ve tried that?

Emily @ Handle the Heat
Emily @ Handle the Heat
Admin
Reply to  Gwen Tan
10 months ago

Hi Gwen! Thanks so much for the kind comment! 🙂 We haven’t tried this recipe with orange instead, but I’m sure it’d be a great swap! Feel free to experiment with it and let us know how it goes. It sounds delish!

Gwen Tan
Gwen Tan
Reply to  Emily @ Handle the Heat
10 months ago

Thanks for the reply Emily! I did – swapped the lemon juice & zest for orange juice & zest. In general, I personally feel the taste of orange to be less bold as compared to lemon, so I increased the juice to about 3 tbsp, and the zest to 2 tablespoons (zest of approx 1.5 large navel oranges, adding 1/2 tsp of orange extract. Oh, I also browned the butter, because.. why not?

They turned out amazing! I felt the orange flavour was not quite prominent enough (for my liking) on the first day, but I had a taste again on the 2nd day and it had developed to have a lovely orange punch to it.

As usual, HTH recipes worked perfectly. Thank you!!! <3

Emily @ Handle the Heat
Emily @ Handle the Heat
Admin
Reply to  Gwen Tan
10 months ago

Yum! Love the addition of brown butter, too! I’ll have to give that a try 🙂 I wonder if prepping the batter and letting it rest in the fridge overnight would make the orange flavor more pronounced the day they’re baked? It’s something worth trying for sure. Thanks for sharing your results!

1 9 10 11